1)  Record the deposit in escrow with a note mistaken comm deposit

2)  Disburse as a check to yourself make the same note

3)  Record the deposit into commission as normal in broker.EZ 

The alternate is to record use the bank feed to record the deposit into escrow and the money out of the escrow using a GL like Deposit Corrections.  The record deposit to commission account like normal in broker.EZ.